CovidV1, an2020, Analysis, bibRecord, 000351

Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event.

Identifieur interne : 000351 ( an2020/Analysis ); précédent : 000350; suivant : 000352

Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event.

Auteurs : D. Paraskevis [Grèce] ; E G Kostaki [Grèce] ; G. Magiorkinis [Grèce] ; G. Panayiotakopoulos [Grèce] ; G. Sourvinos [Grèce] ; S. Tsiodras [Grèce]

Source :

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases [ 1567-7257 ] ; 2020.

RBID : pubmed:32004758

Abstract

A novel coronavirus (2019-nCoV) associated with human to human transmission and severe human infection has been recently reported from the city of Wuhan in China. Our objectives were to characterize the genetic relationships of the 2019-nCoV and to search for putative recombination within the subgenus of sarbecovirus.

DOI: 10.1016/j.meegid.2020.104212
PubMed: 32004758

Affiliations:

Links to Exploration step

pubmed:32004758

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event.</title>
<author><name sortKey="Paraskevis, D" sort="Paraskevis, D" uniqKey="Paraskevis D" first="D" last="Paraskevis">D. Paraskevis</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens, Greece. Electronic address: dparask@med.uoa.gr.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Kostaki, E G" sort="Kostaki, E G" uniqKey="Kostaki E" first="E G" last="Kostaki">E G Kostaki</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Magiorkinis, G" sort="Magiorkinis, G" uniqKey="Magiorkinis G" first="G" last="Magiorkinis">G. Magiorkinis</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Panayiotakopoulos, G" sort="Panayiotakopoulos, G" uniqKey="Panayiotakopoulos G" first="G" last="Panayiotakopoulos">G. Panayiotakopoulos</name>
<affiliation wicri:level="3"><nlm:affiliation>National Public Health Organization (NPHO), Athens, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>National Public Health Organization (NPHO), Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Sourvinos, G" sort="Sourvinos, G" uniqKey="Sourvinos G" first="G" last="Sourvinos">G. Sourvinos</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratory of Clinical Virology, School of Medicine, University of Crete, Heraklion, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Laboratory of Clinical Virology, School of Medicine, University of Crete, Heraklion</wicri:regionArea>
<wicri:noRegion>Heraklion</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Tsiodras, S" sort="Tsiodras, S" uniqKey="Tsiodras S" first="S" last="Tsiodras">S. Tsiodras</name>
<affiliation wicri:level="3"><nlm:affiliation>Medical School, National and Kapodistrian University of Athens, Athens, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Medical School, National and Kapodistrian University of Athens, Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2020">2020</date>
<idno type="RBID">pubmed:32004758</idno>
<idno type="pmid">32004758</idno>
<idno type="doi">10.1016/j.meegid.2020.104212</idno>
<idno type="wicri:Area/PubMed/Corpus">000586</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000586</idno>
<idno type="wicri:Area/PubMed/Curation">000586</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000586</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000325</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000325</idno>
<idno type="wicri:Area/Ncbi/Merge">000813</idno>
<idno type="wicri:Area/Ncbi/Curation">000813</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000813</idno>
<idno type="wicri:Area/Main/Merge">000353</idno>
<idno type="wicri:Area/Main/Curation">000351</idno>
<idno type="wicri:Area/Main/Exploration">000351</idno>
<idno type="wicri:Area/an2020/Extraction">000351</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event.</title>
<author><name sortKey="Paraskevis, D" sort="Paraskevis, D" uniqKey="Paraskevis D" first="D" last="Paraskevis">D. Paraskevis</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens, Greece. Electronic address: dparask@med.uoa.gr.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Kostaki, E G" sort="Kostaki, E G" uniqKey="Kostaki E" first="E G" last="Kostaki">E G Kostaki</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Magiorkinis, G" sort="Magiorkinis, G" uniqKey="Magiorkinis G" first="G" last="Magiorkinis">G. Magiorkinis</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Department of Hygiene Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Panayiotakopoulos, G" sort="Panayiotakopoulos, G" uniqKey="Panayiotakopoulos G" first="G" last="Panayiotakopoulos">G. Panayiotakopoulos</name>
<affiliation wicri:level="3"><nlm:affiliation>National Public Health Organization (NPHO), Athens, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>National Public Health Organization (NPHO), Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Sourvinos, G" sort="Sourvinos, G" uniqKey="Sourvinos G" first="G" last="Sourvinos">G. Sourvinos</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratory of Clinical Virology, School of Medicine, University of Crete, Heraklion, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Laboratory of Clinical Virology, School of Medicine, University of Crete, Heraklion</wicri:regionArea>
<wicri:noRegion>Heraklion</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Tsiodras, S" sort="Tsiodras, S" uniqKey="Tsiodras S" first="S" last="Tsiodras">S. Tsiodras</name>
<affiliation wicri:level="3"><nlm:affiliation>Medical School, National and Kapodistrian University of Athens, Athens, Greece.</nlm:affiliation>
<country xml:lang="fr">Grèce</country>
<wicri:regionArea>Medical School, National and Kapodistrian University of Athens, Athens</wicri:regionArea>
<placeName><settlement type="city">Athènes</settlement>
<region nuts="2" type="region">Attique (région)</region>
</placeName>
</affiliation>
</author>
</analytic>
<series><title level="j">Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases</title>
<idno type="eISSN">1567-7257</idno>
<imprint><date when="2020" type="published">2020</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">A novel coronavirus (2019-nCoV) associated with human to human transmission and severe human infection has been recently reported from the city of Wuhan in China. Our objectives were to characterize the genetic relationships of the 2019-nCoV and to search for putative recombination within the subgenus of sarbecovirus.</div>
</front>
</TEI>
<affiliations><list><country><li>Grèce</li>
</country>
<region><li>Attique (région)</li>
</region>
<settlement><li>Athènes</li>
</settlement>
</list>
<tree><country name="Grèce"><region name="Attique (région)"><name sortKey="Paraskevis, D" sort="Paraskevis, D" uniqKey="Paraskevis D" first="D" last="Paraskevis">D. Paraskevis</name>
</region>
<name sortKey="Kostaki, E G" sort="Kostaki, E G" uniqKey="Kostaki E" first="E G" last="Kostaki">E G Kostaki</name>
<name sortKey="Magiorkinis, G" sort="Magiorkinis, G" uniqKey="Magiorkinis G" first="G" last="Magiorkinis">G. Magiorkinis</name>
<name sortKey="Panayiotakopoulos, G" sort="Panayiotakopoulos, G" uniqKey="Panayiotakopoulos G" first="G" last="Panayiotakopoulos">G. Panayiotakopoulos</name>
<name sortKey="Sourvinos, G" sort="Sourvinos, G" uniqKey="Sourvinos G" first="G" last="Sourvinos">G. Sourvinos</name>
<name sortKey="Tsiodras, S" sort="Tsiodras, S" uniqKey="Tsiodras S" first="S" last="Tsiodras">S. Tsiodras</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/CovidV1/Data/an2020/Analysis

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000351 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/an2020/Analysis/biblio.hfd -nk 000351 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Sante
   |area=    CovidV1
   |flux=    an2020
   |étape=   Analysis
   |type=    RBID
   |clé=     pubmed:32004758
   |texte=   Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/an2020/Analysis/RBID.i   -Sk "pubmed:32004758" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/an2020/Analysis/biblio.hfd   \
       | NlmPubMed2Wicri -a CovidV1

This area was generated with Dilib version V0.6.33.
Data generation: Fri Mar 27 18:14:15 2020. Site generation: Sun Jan 31 15:15:08 2021

Serveur d'exploration Covid

Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event.

Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event.

Source :

Abstract

Links toward previous steps (curation, corpus...)

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki

	Serveur d'exploration Covid
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.